PPI Datasets
Collection
Datasets related to protein-protein interaction, binding sites, or binding affinity. • 23 items • Updated • 6
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We map Uniprot ids with the ID mapping tool and record entires in which both sequences are found. PFAM entires are ommitted. Each split corresponds to a section of the dataset, labeled the same as the image below:
Please cite their paper if you use this dataset in your work
@article{Blohm2013,
title = {Negatome 2.0: a database of non-interacting proteins derived by literature mining, manual annotation and protein structure analysis},
volume = {42},
ISSN = {1362-4962},
url = {http://dx.doi.org/10.1093/nar/gkt1079},
DOI = {10.1093/nar/gkt1079},
number = {D1},
journal = {Nucleic Acids Research},
publisher = {Oxford University Press (OUP)},
author = {Blohm, Philipp and Frishman, Goar and Smialowski, Pawel and Goebels, Florian and Wachinger, Benedikt and Ruepp, Andreas and Frishman, Dmitrij},
year = {2013},
month = nov,
pages = {D396–D400}
}