#!/usr/bin/env python3 """Validate this dataset's data, provenance and source preservation locally.""" from __future__ import annotations import argparse import ast import csv import hashlib import json import math from pathlib import Path import sys ROOT=Path(__file__).resolve().parent.parent def digest(path): return hashlib.sha256(path.read_bytes()).hexdigest() def records(path): return [json.loads(line) for line in path.read_text(encoding='utf-8').splitlines() if line] def check_integrity(): from upload_dataset import checked_paths paths=checked_paths() return len(paths)-1 def validate(loaders=False): stats=json.loads((ROOT/'DATASET_STATS.json').read_text()) artifacts=records(ROOT/'data/artifacts.jsonl') assert len(artifacts)==82 for a in artifacts: p=ROOT/a['path'] assert p.stat().st_size==a['size_bytes'] and digest(p)==a['sha256'], a['path'] original_sums=(ROOT/'research/SHA256SUMS.txt').read_text().splitlines() for line in original_sums: d,name=line.split(' ',1) assert digest(ROOT/'research'/name)==d, name checks=records(ROOT/'data/verification_checks.jsonl') raw=json.loads((ROOT/'research/data/verification.json').read_text()) assert len(checks)==len(raw['checks'])==1139 assert all(c['passed'] for c in checks) for c,old in zip(checks,raw['checks']): assert c['check_name']==old['name'] and c['passed']==old['passed'] expected='' if old['detail'] is None else (old['detail'] if isinstance(old['detail'],str) else json.dumps(old['detail'])) assert c['detail']==expected corpus=records(ROOT/'data/research_corpus.jsonl') groups={} for c in corpus: groups.setdefault(c['source_path'],[]).append(c) for path,chunks in groups.items(): chunks.sort(key=lambda c:c['chunk_index']) assert ''.join(c['text'] for c in chunks)==(ROOT/path).read_text(encoding='utf-8') trajectories=records(ROOT/'data/nonlinear_trajectories.jsonl') raw_runs=json.loads((ROOT/'research/data/nonlinear_demo.json').read_text())['results'] assert len(trajectories)==303 for r in trajectories: original=raw_runs[r['run_id']-1]; i=r['sample_index'] for key in ['time','energy','helicity']: assert r[key]==original['times' if key=='time' else key][i] assert r['epsilon']==original['epsilon'] report=[] for s in stats['configurations']: p=ROOT/s['path'] if s['storage']=='jsonl': rows=records(p) assert all(list(r)==s['columns'] for r in rows) else: with p.open(newline='') as f: reader=csv.DictReader(f);rows=list(reader) assert reader.fieldnames==s['columns'] assert all(all(math.isfinite(float(v)) for v in r.values()) for r in rows) assert len(rows)==s['row_count'] if 'source_path' in s: with (ROOT/s['source_path']).open(newline='') as f: original_rows=list(csv.DictReader(f)) assert rows==[{k:float(v) for k,v in r.items()} for r in original_rows], s['config_name'] if loaders: from datasets import load_dataset ds=load_dataset(str(ROOT),s['config_name'],split='train') assert len(ds)==s['row_count'], s['config_name'] assert ds.column_names==s['columns'], s['config_name'] report.append({'configuration':s['config_name'],'rows':len(rows),'passed':True}) assert len(report)==19 for c in records(ROOT/'data/claims.jsonl'): assert (ROOT/c['source_path']).is_file() assert ('\\label{'+c['source_label']+'}') in (ROOT/c['source_path']).read_text() for p in (ROOT/'scripts').glob('*.py'): ast.parse(p.read_text(),filename=str(p)) if loaders: import yaml from huggingface_hub import DatasetCard card=DatasetCard.load(str(ROOT/'README.md')) assert len(card.data.configs)==19 assert card.data.to_dict().get('license') is None assert sum(bool(c.get('default')) for c in card.data.configs)==1 meta=yaml.safe_load((ROOT/'README.md').read_text().split('---',2)[1]) assert all((ROOT/c['data_files'][0]['path']).is_file() for c in meta['configs']) return {'configurations':report,'source_artifacts_verified':82,'source_documents_reassembled':len(groups), 'saved_verification_records':1139,'trajectory_records_checked':303,'loader_checks_performed':loaders} def main(): p=argparse.ArgumentParser(description=__doc__) p.add_argument('--loaders',action='store_true',help='Also test all configurations with datasets and parse the DatasetCard (requires requirements-dataset.txt).') p.add_argument('--integrity-only',action='store_true') p.add_argument('--skip-integrity',action='store_true',help='For intentional edits before deliberately regenerating the manifest.') args=p.parse_args() if not args.skip_integrity: print(f'Integrity verified for {check_integrity()} hashed files.') if args.integrity_only: return 0 r=validate(args.loaders) print(json.dumps(r,indent=2)) return 0 if __name__=='__main__': try: raise SystemExit(main()) except (AssertionError,ValueError,OSError,ImportError) as error: print(f'Validation failed: {type(error).__name__}: {error}',file=sys.stderr) raise SystemExit(1)